BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006F08SP1|AL425570
(979 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1699 865 0.0
>3x_Contig1699
Length = 18038
Score = 865 bits (426), Expect = 0.0
Identities = 545/589 (92%)
Strand = Plus / Plus
Query: 1 caaacatcttaagaaaatcatctctccaaatgttcgacagcatgcgattccaatacaagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 17360 caaacatcttaagaaaatcatctctccaaatgttcgacagcatgcgattcctatacaagc 17419
Query: 61 acaaaaataaaccataatacaaaacatagccacaggccgacgtcccaatctatccgccaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17420 acaaaaataaaccataatacaaaacatagccacaggccgacgtcccaatctatccgccaa 17479
Query: 121 acctcccataatcacggggaagataccttggcatagtgaatacactacaacggttacatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17480 acctcccataatcacggggaagataccttggcatagtgaatacactacaacggttacatt 17539
Query: 181 aaccaaactcacgctgacgttaaattctttttcaataatactcaatgcggggaagtaaat 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 17540 aaccaaactcacgctgacgttaaattctttttcaataatactcaatgctgggaagtaaat 17599
Query: 241 cgtttgagcgatggtcgaataaaatccactcaacgcacatattaccactaggaaaagttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17600 cgtttgagcgatggtcgaataaaatccactcaacgcacatattaccactaggaaaagttt 17659
Query: 301 gtcatgcttagagaatctggtgtaaggaatgccgtcaaagtkggtcgcagatgggggaga 360
|||||||||||||||||| |||||||||||||||||||||| ||| ||||| || |||
Sbjct: 17660 gtcatgcttagagaatcttgtgtaaggaatgccgtcaaagtttgtctcagatttggtaga 17719
Query: 361 gggcaggaaggaaagcgggcggtgggaatccgtcacggcgaggcggtkatcagttttttg 420
| ||| ||||||||| |||||| |||||||||||| | || | || ||||||||||||
Sbjct: 17720 gttcagtaaggaaagctggcggtttgaatccgtcacgtctagtctgttatcagttttttg 17779
Query: 421 tattttctcagcatgttccaaatacaagttcggagggtcgggagcatgttcttccaatac 480
|||||||||||||||||||| |||||||||| |||| |||| ||||||||||||||||||
Sbjct: 17780 tattttctcagcatgttccatatacaagttctgaggttcggtagcatgttcttccaatac 17839
Query: 481 ctcggcatcatcggcatccatattgttatatgawsgcactgaaacgggagaatctgcatc 540
|||| |||||||| ||||||||||||||||||| |||||||||| |||| ||| ||||
Sbjct: 17840 ctcgtcatcatcgtcatccatattgttatatgaactcactgaaacgtgagattcttcatc 17899
Query: 541 ggccatakgtggcagtgtacggtcagcgcnatantcaccctcaancata 589
| ||||| | |||| ||| ||| ||| ||| |||||||||| ||||
Sbjct: 17900 gtccatagttttcagtttactttcatcgctatattcaccctcaatcata 17948
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.716 1.33
Gapped
Lambda K H
1.41 0.716 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 12,905
Number of Sequences: 1807
Number of extensions: 12905
Number of successful extensions: 1515
Number of sequences better than 1.0e-20: 1
length of query: 979
length of database: 10,358,551
effective HSP length: 16
effective length of query: 963
effective length of database: 10,329,639
effective search space: 9947442357
effective search space used: 9947442357
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.4 bits)
S1: 12 (24.8 bits)
S2: 49 (100.0 bits)